The detailed information of tRNA gene sequence


Sequence ID>CL170100178
Genome IDCP013211
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Nasuia deltocephalinicola PUNC [CP013211]
Start position on genome 30582
End posion on genome 30839
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tatctcttta
tRNA gene sequence 
ATCGGAATGATGAAATTGGTAAACATAGCAGACTTAAAATCTGCGGTCTTATAGACTTGT
CGGTTCAATTCCGACTTCCGATAttt
Downstream region at tRNA end position 
ttatttttta
Secondary structure (Cloverleaf model)
>CL170100178	Leu	TAA
                   a      Attt ttatttttta
                     A - T
                     T - A
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T T
                    T     C A G C C     A
      T A A        G      | | | | |     A
    T       A G T A       G T C G G     C
    G         | | |                 T T
    G       A C A T
      T A A        A     GGTCTTATAGACTT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=175 (in A-loop)
AATTTGATTTGAGTGCCACATAGTGATATGTGAGTAGAATTCTTCAAATTCGGCGAAAATCTAATAAAAG
ATCAACACCGAGCCAAGCTTTTTATAATAAAGAAGGTGTAGAGACTATACGGAGAATATCAAAAATTTTT
TGATAAAGAAATAGTCCAGCATATATTTATATGAG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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