The detailed information of tRNA gene sequence


Sequence ID>CL172100014
Genome IDCP010424
Search identical group
Phylum/ClassUnclassified
Speciesarchaeon GW2011_AR10 [CP010424]
Start position on genome 66990
End posion on genome 67234
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttactgcaa
tRNA gene sequence 
GGGGTCGTAGTCTAGTCTGGTCTAGGATGCGAGCTTTGGGAGCTTGTGACGGGGGTTCAA
ATCCTCCCGGCCCCAtta
Downstream region at tRNA end position 
gccggttgcg
Secondary structure (Cloverleaf model)
>CL172100014	Pro	TGG
                   a      Atta gccggttgcg
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     C C T C C     A
    C T G A        A      | | + | |     A
  T         T C T G       G G G G G     C
  G         + | | +                 T T
  G         G G A T
    T C T A        G     TGAC
                    C - G
                    G + T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       G *
                    T G G
intron: position=38, length=170 (in A-loop)
ACAGCTGAAAGGTCAGCTGGCAACCTATATGTCAAGAGATTTCGCTGCGCTCAATCCCTTATTAATTTGG
ACTGCATTATGGGCTCAAATTGTAAGGGTTTTCAGCGTTCGAACCTTGATTAATTTGTAGGCAATAGCTG
GGTTACTTTATGGCTATTCAGTTGCGAAAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK