The detailed information of tRNA gene sequence


Sequence ID>CL170500017
Genome IDCP010426
Search identical group
Phylum/ClassUnclassified
Speciesarchaeon GW2011_AR20 [CP010426]
Start position on genome 382344
End posion on genome 382440
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttattttaT
tRNA gene sequence 
GCCACGGTCGCATAACCTGGTAGTGCACTGGTCTTGAGAACCAGCGTCCGAAAGGACTTC
TCGGTTCAAATCCGAGCCGTGGCGTta
Downstream region at tRNA end position 
gttttataaa
Secondary structure (Cloverleaf model)
>CL170500017	Ser	TGA
                   T      GTta gttttataaa
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     G A G C C     A
      C A A        C      | | | | |     A
    C       T A C G       C T C G G     C
    T       + | | |                 T T
    G       G T G C
      G T A        A     CGTCCGAAAGGACTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G *
                    T G A
intron: position=38, length=11 (in A-loop)
CTTTTTAAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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