The detailed information of tRNA gene sequence


Sequence ID>CHL090800211
Genome IDDQ821119
Search identical group
Phylum/ClassViridiplantae
SpeciesAngiopteris evecta
Start position on genome 57708
End posion on genome 57097
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgttatatta
tRNA gene sequence 
AGGGCTATAGCTCAGCGGTAGAGCACCTCGTTTTTTTACCGAGAATGTCTACGGTTCGAA
TCCGTATAGCCCTAaat
Downstream region at tRNA end position 
tacttcacta
Secondary structure (Cloverleaf model)
>CHL090800211	Val	TAC
                   a      Aaat tacttcacta
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A T G C C     A
    G C G A        A      | | | | |     G
  G         C T C G       T A C G G     C
  T               +                 T T
  A         A C C T
    G A G C        C     GTC
                    G + T
                    T - A
                    T - A
                   *T + G
                    T - A
                  T       G
                  T       C
                    T A C
intron: position=31, length=538
ACACGTGCGCCAATGCTTTTCGAGAATAGTTTATCGATCTTCTTCCGATTCATAAAAAAAATGTTATGTG
AAATCTTTTGTCTTACTCCCTATCCGGATAGGAGGGAACAATAGCATGACAAAAAGCTTAAGTCTTGATA
AGTCTTGAATAGATTATATCGTTGATATGGTAAATCCGAAGTTGATTGAATGCTAGGGATGATGGGGAAA
ATACGAGGACCTCCAGATATTCTCTATCTCGCTTTATGAACTTTAAGGTGTATAAAGTATCATAATCTCA
TTGGAAGTGATAGAAACTCTATTTGAGTTGATCCATTCCTGAATAAGGCAAACCTACGTCAACATCGAAG
ACTCTCTCGAAAAACTTTGGGATTGCTTTGAAATAATTCTTTGAGCACACGGAACCATCTTATTATCTCG
TTGAAAAGAAAAGGATGGAAATTTAACTAATGGAATTTTTAGTTAACGAGAGAGCCCAATGCAAAGAGAA
GATGCATGTTGGGTTCATTAAACAGTTCAAACATTATACTTTGATCTG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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