The detailed information of tRNA gene sequence


Sequence ID>CHL090800325
Genome IDX04465
Search identical group
Phylum/ClassViridiplantae
SpeciesMarchantia polymorpha
Start position on genome 53652
End posion on genome 53051
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcagtattaa
tRNA gene sequence 
AGGGCTATAGCTCAGCGGTAGAGCGCCTCGTTTTTTTACCGAGAATGTCTACGGTTCAAA
TCCGTATAGCCCTAaat
Downstream region at tRNA end position 
ttgttttttt
Secondary structure (Cloverleaf model)
>CHL090800325	Val	TAC
                   a      Aaat ttgttttttt
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A T G C C     A
    G C G A        A      | | | | |     A
  G         C T C G       T A C G G     C
  T         |     +                 T T
  A         G C C T
    G A G C        C     GTC
                    G + T
                    T - A
                    T - A
                   *T + G
                    T - A
                  T       G
                  T       C
                    T A C
intron: position=31, length=528
ACACGTGCGCCAATGCTTATCAAAAATTTTTTTTCGATTTGTCGATTCACAACTAAAAGTTTTCTAATTT
TTGTGAAATAGAAAATGTCTTACTCTTTGATTTAATCATTGAGAAAAATAGCCTGACACAAATAATTTCT
ATTATTTATTTGAAATTACATTTTTAGTTGATATGGTTAATTTTTTCTTTTAATGTTATTACATGATGAG
AATTACGGGGAACTCAAGATATTCTTTTTTTGCTTTATGAAATTTTAAGGTGTATAAAATTTCATATTAT
TTTAGCAAGAGAAACTCTTTATTGAGTAAATCCATGTAAAAAACAAACCTAAGTCAATATTTGATAATTT
TTGAAAAACTTTGGGATTGTATTAAAATTTTTTAGAATTTTAAGCAAACGGAACCATCTTATTATTAACA
AAAAAAAGGATGGAAAATAACTAAATTAACACTTAGTTAATAAACGAGCCCAATGCATAAAAACATGCAT
GTTGGGTTCTTAAAGCAGTTCTTAATTTAAAAGAACTG
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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