The detailed information of tRNA gene sequence


Sequence ID>VRL183000129
Genome IDKF481688
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesEmiliania huxleyi virus 164 EhV-164 (KF481688)
Start position on genome 40388
End posion on genome 40315
Amino Acid His
Anticodon ATG
Upstream region at tRNA start position 
gctaggactt
tRNA gene sequence 
GTCCCATTAACTCAGTTGGTAGAGTGTGGTTCCTATGAAGCTATGGTCGGCGTTTCGAGC
ACGCCATGGGACACta
Downstream region at tRNA end position 
gtccggatgg
Secondary structure (Cloverleaf model)
>VRL183000129	His	ATG
                   t      ACta gtccggatgg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          C G
                    T     C C G C A     A
      T G A        A      | | | | |     G
    T       C T C A       G G C G T     C
    G       | | | |                 T T
    G       G A G T
      T A          G     TGGTC
                    T - A
                    G + T
                    G - C
                    T + G
                    T - A
                  C       A
                  C       G
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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