The detailed information of tRNA gene sequence


Sequence ID>VRL183000176
Genome IDLC015647
Search identical group
Phylum/ClassVaridnaviria
SpeciesYellowstone lake phycodnavirus 1 (LC015647)
Start position on genome 60898
End posion on genome 60970
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
gtgcgcagac
tRNA gene sequence 
GCCTCTGTAGCTCAATTGGTAGAGCACTCGTTTAGTAAGCGAGAGGTATTGAGATCAAAA
CTCAACGGAGGCAttt
Downstream region at tRNA end position 
ccggttccat
Secondary structure (Cloverleaf model)
>VRL183000176	Thr	AGT
                   c      Attt ccggttccat
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          A A
                    T     A A C T C     A
      T A A        A      | | | | |     A
    T       C T C G       T T G A G     C
    G       | | | |                 A T
    G       G A G C
      T A          A     AGGTA
                    C - G
                    T - A
                    C - G
                    G - C
                    T + G
                  T       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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