The detailed information of tRNA gene sequence


Sequence ID>VRL181000030
Genome IDHM004429
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesMicromonas sp. RCC1109 virus MpV1 (HM004429)
Start position on genome 157972
End posion on genome 158055
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aggtattttT
tRNA gene sequence 
GCTGAGATGCCCGAGTGGTCTAAGGGGGACGTCTTAAGAACGTCTGGCGCAAGCCTCACG
GGTTCGAACCCCGTTCTCAGCATtt
Downstream region at tRNA end position 
agcactcata
Secondary structure (Cloverleaf model)
>VRL181000030	Leu	TAA
                   T      ATtt agcactcata
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          C A
                    T     T G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       A C G G G     C
    G         | | |                 T T
    T       A G G G
      C T A        G     TGGCGCAAGCCTC
                    G - C
                    A - T
                    C - G
                    G - C
                    T - A
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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