The detailed information of tRNA gene sequence


Sequence ID>VRL181000031
Genome IDHM004429
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesMicromonas sp. RCC1109 virus MpV1 (HM004429)
Start position on genome 158059
End posion on genome 158130
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
tcagcattta
tRNA gene sequence 
GCACTCATAGCTCAGGGGTAGAGCGTAAGTTTAGTAAGCTTAAGGTCAAGGGTTCAAATC
CCTTTGAGTGCAttt
Downstream region at tRNA end position 
aaaacatttg
Secondary structure (Cloverleaf model)
>VRL181000031	Thr	AGT
                   a      Attt aaaacatttg
                     G - C
                     C - G
                     A - T
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     T T C C C     A
        G A        A      | | | | |     A
      G     C T C G       A A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T - A
                    A - T
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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