The detailed information of tRNA gene sequence


Sequence ID>VRL181000032
Genome IDHM004430
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesBathycoccus sp. RCC1105 virus BpV2 (HM004430)
Start position on genome 129949
End posion on genome 130030
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
ataattttgt
tRNA gene sequence 
GATGCCGTGGCCGAGTGGTCTAAGGCGCCAGATTAAGGCTCTGGTTCGAAAGAGCGTGTG
TTCAAATCACACCGGCATCACCg
Downstream region at tRNA end position 
tgcgatagct
Secondary structure (Cloverleaf model)
>VRL181000032	Leu	AAG
                   t      ACCg tgcgatagct
                     G - C
                     A - T
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C A C A C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G T G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TTCGAAAGAGC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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