The detailed information of tRNA gene sequence


Sequence ID>VRL181000035
Genome IDHM004432
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesBathycoccus sp. RCC1105 virus BpV1 (HM004432)
Start position on genome 131783
End posion on genome 131864
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
ataattttgt
tRNA gene sequence 
GATGCCGTGGCCGAGTGGTCTAAGGCGCCAGATTAAGGCTCTGGTTCGGAAGAGCGCAGG
TTCAAATCCTGTCGGCATCACCg
Downstream region at tRNA end position 
tgcgatagct
Secondary structure (Cloverleaf model)
>VRL181000035	Leu	AAG
                   t      ACCg tgcgatagct
                     G - C
                     A - T
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     A
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TTCGGAAGAGC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       C
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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