The detailed information of tRNA gene sequence


Sequence ID>VRL181000058
Genome IDJF801956
Search identical group
Phylum/ClassMimiviridae
SpeciesAcanthamoeba castellanii mamavirus Hal-V (JF801956)
Start position on genome 363679
End posion on genome 363750
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acagtcaact
tRNA gene sequence 
GGATCGTTAGCTCAATGGTAGAGCGCTCGCCTGCAGAGCGATAGGTTATCAGTTCAATTC
TGATACGATCCTttt
Downstream region at tRNA end position 
ttagatgtat
Secondary structure (Cloverleaf model)
>VRL181000058	Cys	GCA
                   t      Tttt ttagatgtat
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     T A G T C     A
        A A        A      | | | | |     A
      T     C T C G       A T C A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTT
                    C   T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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