The detailed information of tRNA gene sequence


Sequence ID>VRL181000059
Genome IDJF801956
Search identical group
Phylum/ClassMimiviridae
SpeciesAcanthamoeba castellanii mamavirus Hal-V (JF801956)
Start position on genome 1140563
End posion on genome 1140633
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgcaacaata
tRNA gene sequence 
GACCTGTTAGTTTAATGGTAAAACGGTCGCCTCCAGAGTGATTGATACTGGTTCGATTCC
GGTACAGGTCCttt
Downstream region at tRNA end position 
taataaaaaa
Secondary structure (Cloverleaf model)
>VRL181000059	Trp	CCA
                   a      Cttt taataaaaaa
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A          T T
                    T     T G G C C     A
        A A        A      | | + | |     G
      T     T T T G       A C T G G     C
      G     | | | |                 T T
      G     A A A C
        T A        G     TGAT
                    G + T
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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