The detailed information of tRNA gene sequence


Sequence ID>VRL181000116
Genome IDJX997154
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus AP110A (JX997154)
Start position on genome 143123
End posion on genome 143196
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aaacacaacT
tRNA gene sequence 
GCCGGTGTAGCTTAGTGGTAAAGCGCTTGCTTCGTAAGCAAGAGACCATGAGTTCGAACC
TCGTCGCGGGCATta
Downstream region at tRNA end position 
aatgtgtttg
Secondary structure (Cloverleaf model)
>VRL181000116	Thr	CGT
                   T      ATta aatgtgtttg
                     G - C
                     C - G
                     C - G
                     G   G
                     G - C
                     T + G
                     G - C          C A
                    T     T G C T C     A
        G A        A      | + | | |     G
      T     T T C G       A T G A G     C
      G     | | | |                 T T
      G     A A G C
        T A        G     AGACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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