The detailed information of tRNA gene sequence


Sequence ID>VRL181000126
Genome IDJX997156
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesAcanthocystis turfacea Chlorella virus Can0610SP (JX997156)
Start position on genome 89004
End posion on genome 89077
Amino Acid Ile
Anticodon AAT
Upstream region at tRNA start position 
ttaaacgcaa
tRNA gene sequence 
GCTTGCTTAGCTCAGTTGGTTAGAGCGATGGTCTAATAAACCATAGGTCGACGGTTCGAG
TCCGTCAGTGAGCAtgt
Downstream region at tRNA end position 
cggcggactt
Secondary structure (Cloverleaf model)
>VRL181000126	Ile	AAT
                   a      Atgt cggcggactt
                     G - C
                     C - G
                     T - A
                     T + G
                     G + T
                     C - G
                     T - A          T G
                    T     C T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    A A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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