The detailed information of tRNA gene sequence


Sequence ID>VRL181000136
Genome IDJX997157
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus Can18-4 (JX997157)
Start position on genome 142138
End posion on genome 142213
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctaaacgcat
tRNA gene sequence 
GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC
CCCGCCAGAGACGCCA
Downstream region at tRNA end position 
ggatgtgtga
Secondary structure (Cloverleaf model)
>VRL181000136	Arg	TCT
                   t      GCCA ggatgtgtga
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     T - A
                     G - C          C C
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       C G C G       G C G G G     C
    G       | | | |                 T T
    A       G C G C
      C A          G     AGGTT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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