The detailed information of tRNA gene sequence


Sequence ID>VRL181000144
Genome IDJX997158
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesAcanthocystis turfacea Chlorella virus Canal-1 (JX997158)
Start position on genome 95218
End posion on genome 95291
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaacgcaa
tRNA gene sequence 
GCTTACTTAGCTCAGTTGGTTAGAGCGCGACTTTCATAAGGTCGAGGTCGACGGTTCGAT
CCCGTCAGTGAGCAagt
Downstream region at tRNA end position 
cggcggacta
Secondary structure (Cloverleaf model)
>VRL181000144	Met	CAT
                   a      Aagt cggcggacta
                     G - C
                     C - G
                     T - A
                     T + G
                     A - T
                     C - G
                     T - A          C T
                    T     C T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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