The detailed information of tRNA gene sequence


Sequence ID>VRL181000260
Genome IDJX997171
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus KS1B (JX997171)
Start position on genome 129957
End posion on genome 130029
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acgtgttcat
tRNA gene sequence 
GGCGAATTAGTATAGTGGTCAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTC
CCCGATTCGTCGCga
Downstream region at tRNA end position 
tcccttagct
Secondary structure (Cloverleaf model)
>VRL181000260	Asp	GTC
                   t      GCga tcccttagct
                     G - C
                     G + T
                     C - G
                     G - C
                     A - T
                     A - T
                     T - A          T T
                    T     G C C C C     A
      T G A        A      | | | | |     A
    G       T A T G       C G G G G     C
    G       + | | +                 T T
    T       G T A T
      C A          C     AGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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