The detailed information of tRNA gene sequence


Sequence ID>VRL181000270
Genome IDJX997173
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus MA-1E (JX997173)
Start position on genome 157948
End posion on genome 158028
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
acacgcgcgc
tRNA gene sequence 
GATAGGGTATGCAAGTGGTCAAAGCAGCTGGTCTCAAGATCCAGTCCTTCGGGTTCGCGG
GTTCGACTCCCGTCTCTATCAtcg
Downstream region at tRNA end position 
ctggcgagca
Secondary structure (Cloverleaf model)
>VRL181000270	Leu	CAA
                   c      Atcg ctggcgagca
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     G + T
                     G - C          T C
                    T     T G C C C     A
      T G A        A      + | | | |     G
    G       A C G T       G C G G G     C
    G         | | |                 T T
    T       A G C A
      C A A        G     TCCTTCGGGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T   T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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