The detailed information of tRNA gene sequence


Sequence ID>VRL181000294
Genome IDJX997176
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus NE-JV-1 (JX997176)
Start position on genome 230210
End posion on genome 230283
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
tgagtgttcc
tRNA gene sequence 
GATCTCGTAGCTCAATTGGTCAGAGCACTGATCTTATGAGTCAGGGGTCGCCGGTTCGAG
TCCGGTCGAGATCAtgc
Downstream region at tRNA end position 
cggcgggcac
Secondary structure (Cloverleaf model)
>VRL181000294	Ile	TAT
                   c      Atgc cggcgggcac
                     G - C
                     A - T
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     T G G C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    A - T
                    T + G
                  C       A
                  T       G
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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