The detailed information of tRNA gene sequence


Sequence ID>VRL181000310
Genome IDJX997178
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesAcanthocystis turfacea Chlorella virus NE-JV-3 (JX997178)
Start position on genome 87542
End posion on genome 87613
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttaaacgcaa
tRNA gene sequence 
GTCGTGGTAGTATAGTGGTTAGTATTCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTC
CCCGCCACGGCGtag
Downstream region at tRNA end position 
tcggcggact
Secondary structure (Cloverleaf model)
>VRL181000310	Asp	GTC
                   a      Gtag tcggcggact
                     G - C
                     T + G
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T T
                    T     G C C C C     A
      T G A        A      | | | | |     A
    G       T A T G       C G G G G     C
    G       + | | +                 T T
    T       G T A T
      T A          T     AGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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