The detailed information of tRNA gene sequence


Sequence ID>VRL181000324
Genome IDJX997179
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus NE-JV-4 (JX997179)
Start position on genome 168176
End posion on genome 168252
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taaaacgctT
tRNA gene sequence 
GGTCGCGTAGCTCAGTCGGATAAGAGCAACAGACTTCTAATCTGTAGGTCGTGGGTTCGA
GCCCCACCGTGATCGAag
Downstream region at tRNA end position 
acgcgaacgg
Secondary structure (Cloverleaf model)
>VRL181000324	Arg	TCT
                   T      GAag acgcgaacgg
                     G - C
                     G + T
                     T - A
                     C - G
                     G + T
                     C - G
                     G - C          C G
                    T     C A C C C     A
    C T G A        A      | | | | |     G
  G         C T C G       G T G G G     C
  G         | | | |                 T T
  A         G A G C
    T A A          A     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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