The detailed information of tRNA gene sequence


Sequence ID>VRL181000344
Genome IDJX997183
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus NYs1 (JX997183)
Start position on genome 180435
End posion on genome 180507
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
aaacgcatca
tRNA gene sequence 
GTTCGCTTAGCTCAGTGGATAGAGCATTGGTCTTATGAGCCAAGGGTCACCGGTTCGATC
CCGGTAGCGAACAtag
Downstream region at tRNA end position 
ccgagcgggc
Secondary structure (Cloverleaf model)
>VRL181000344	Ile	TAT
                   a      Atag ccgagcgggc
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C
                     C - G
                     T - A          C T
                    T     T G G C C     A
      T G A        A      | | | | |     G
    G       C T C G       A C C G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       G
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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