The detailed information of tRNA gene sequence


Sequence ID>VRL181000346
Genome IDJX997183
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus NYs1 (JX997183)
Start position on genome 180763
End posion on genome 180837
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttaaacgcat
tRNA gene sequence 
GGCCACGTGATGAAATGGATATCATATTCGACTTCTAATCGAAATTTCCGAGTTCGATCC
TCGGCGTGGCTGCCA
Downstream region at tRNA end position 
ggcacattga
Secondary structure (Cloverleaf model)
>VRL181000346	Arg	TCT
                   t      GCCA ggcacattga
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     G G C T C     A
      T A A        G      | | | | |     G
    G       A G T A       C C G A G     C
    G       | | | |                 T T
    A       T C A T
      T A          A     ATTT
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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