The detailed information of tRNA gene sequence


Sequence ID>VRL181000406
Genome IDKF493731
Search identical group
Phylum/ClassMimiviridae
SpeciesHirudovirus strain Sangsue (KF493731)
Start position on genome 828461
End posion on genome 828390
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acagtcaact
tRNA gene sequence 
GGATCGTTAGCTCAATGGTAGAGCGCTCGCCTGCAGAGCGATAGGTTATCAGTTCAATTC
TGATACGATCCTttt
Downstream region at tRNA end position 
ttagatgtat
Secondary structure (Cloverleaf model)
>VRL181000406	Cys	GCA
                   t      Tttt ttagatgtat
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     T A G T C     A
        A A        A      | | | | |     A
      T     C T C G       A T C A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTT
                    C   T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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