The detailed information of tRNA gene sequence


Sequence ID>VRL181000497
Genome IDAP017398
Search identical group
Phylum/ClassVaridnaviria
SpeciesTokyovirus A1 (AP017398)
Start position on genome 5341
End posion on genome 5424
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tcaccctctG
tRNA gene sequence 
TATCGTTTGGCGGAATTGGTAGACGCGATGGGCTTAAAACCTATTTCCATGAGGAGTATT
GGTTCGATTCCAATAACGGTTTAta
Downstream region at tRNA end position 
ctaggcgaaa
Secondary structure (Cloverleaf model)
>VRL181000497	Leu	TAA
                   G      TAta ctaggcgaaa
                     T   T
                     A - T
                     T + G
                     C - G
                     G - C
                     T - A
                     T - A          T T
                    T     T A A C C     A
      T A A        G      | | | | |     G
    T       G G C G       A T T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTCCATGAGGAGT
                    A - T
                    T - A
                    G + T
                    G - C
                    G - C
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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