The detailed information of tRNA gene sequence


Sequence ID>VRL181000506
Genome IDAP017645
Search identical group
Phylum/ClassMimiviridae
SpeciesAcanthamoeba castellanii mimivirus Mimivirus shirakomae (AP017645)
Start position on genome 1131366
End posion on genome 1131436
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgcaacaata
tRNA gene sequence 
GACCTGTTAGTTTAATGGTAAAACGGTAGCCTCCAGAGTGATTGATACTGGTTCGATTCC
GGTATAGGTCCatt
Downstream region at tRNA end position 
taataaaaaa
Secondary structure (Cloverleaf model)
>VRL181000506	Trp	CCA
                   a      Catt taataaaaaa
                     G - C
                     A - T
                     C - G
                     C - G
                     T - A
                     G + T
                     T - A          T T
                    T     T G G C C     A
        A A        A      | | + | |     G
      T     T T T G       A C T G G     C
      G     | | | |                 T T
      G     A A A C
        T A        G     TGAT
                    G + T
                    T - A
                    A   G
                    G + T
                    C - G
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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