The detailed information of tRNA gene sequence


Sequence ID>VRL181000540
Genome IDKX589235
Search identical group
Phylum/ClassHerpesvirales
SpeciesColumbid alphaherpesvirus 1 HLJ (KX589235)
Start position on genome 4508
End posion on genome 4586
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gggaagccgT
tRNA gene sequence 
CCCTCGTTAGTTCAGTGGTAGAATACCCGCCTCCTCTCCGGGCGGGAGACCGAGGTTCGA
TTCCTCGACGAGGAAACC
Downstream region at tRNA end position 
ggtggactga
Secondary structure (Cloverleaf model)
>VRL181000540	Arg	CCT
                   T      AACC ggtggactga
                     C   A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     G C T C C     A
        G A        A      | | | | |     G
      T     C T T G       C G A G G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     CGGGAGAC
                    C - G
                    C - G
                    C - G
                    G - C
                    C   C
                  C       T
                  T       C
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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