The detailed information of tRNA gene sequence


Sequence ID>VRL181000542
Genome IDKX589235
Search identical group
Phylum/ClassHerpesvirales
SpeciesColumbid alphaherpesvirus 1 HLJ (KX589235)
Start position on genome 11736
End posion on genome 11806
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgtaacccag
tRNA gene sequence 
TCCTCGTTAGTATAGTGGTAGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCC
CCGACGAGGAGgga
Downstream region at tRNA end position 
ggttaacgcg
Secondary structure (Cloverleaf model)
>VRL181000542	Asp	GTC
                   g      Ggga ggttaacgcg
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     T - A          T T
                    T     G C C C C     A
        G A        A      | | | | |     G
      T     T A T G       C G G G G     C
      G     + | | +                 T T
      G     G T A T
        T A        G     AGAC
                    C - G
                    C - G
                    C - G
                    G - C
                    T - A
                  C       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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