The detailed information of tRNA gene sequence


Sequence ID>VRL181000556
Genome IDKX853510
Search identical group
Phylum/Classunclassifiedviruses
SpeciesVirus Rctr197k (KX853510)
Start position on genome 188833
End posion on genome 188756
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cattccgtcT
tRNA gene sequence 
AGGGAGAAAGTGTAAGTGGACGCACGTCGGTCTCCAAAACCGAAAGGATAGTTGGGTTCG
ATTCCCCGTCTCCCTGAtc
Downstream region at tRNA end position 
tgtccctatc
Secondary structure (Cloverleaf model)
>VRL181000556	Trp	CCA
                   T      GAtc tgtccctatc
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T T
                    A     G C C C C     A
      G A A        A      +   | | |     G
    T       T G T G       T T G G G     C
    G       + | | |                 T T
    G       G C A C
      A C          G     AAGGATAG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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