The detailed information of tRNA gene sequence


Sequence ID>VRL181000587
Genome IDKX857749
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesOnly Syngen Nebraska virus 5 (KX857749)
Start position on genome 168747
End posion on genome 168819
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acgtgtatat
tRNA gene sequence 
GACGAATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTC
CCCGATTCGTCGCga
Downstream region at tRNA end position 
tagtgtatgc
Secondary structure (Cloverleaf model)
>VRL181000587	Asp	GTC
                   t      GCga tagtgtatgc
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     A - T
                     T - A          T T
                    T     G C C C C     A
      T G A        A      | | | | |     A
    G       T A T G       C G G G G     C
    G       + | | +                 T T
    T       G T A T
      T A          C     AGAC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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