The detailed information of tRNA gene sequence


Sequence ID>VRL181000588
Genome IDKX857749
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesOnly Syngen Nebraska virus 5 (KX857749)
Start position on genome 168820
End posion on genome 168903
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gattcgtcgc
tRNA gene sequence 
GATAGTGTATGCAAGTGGTCAAAGCGCCTGGTCTCAAGATCCAGTCCTTCGGGTTCGCGG
GTTCGACTCCCGTCGCTATCACCA
Downstream region at tRNA end position 
gccggtttag
Secondary structure (Cloverleaf model)
>VRL181000588	Leu	CAA
                   c      ACCA gccggtttag
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     T + G
                     G - C          T C
                    T     T G C C C     A
      T G A        A      + | | | |     G
    G       A C G T       G C G G G     C
    G         | | +                 T T
    T       A G C G
      C A A        C     TCCTTCGGGTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T   T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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