The detailed information of tRNA gene sequence


Sequence ID>VRL181000609
Genome IDKY523104
Search identical group
Phylum/ClassVaridnaviria
SpeciesTupanvirus soda lake (KY523104)
Start position on genome 294874
End posion on genome 294787
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttaatgttc
tRNA gene sequence 
GACATCGTGGCTGAGCGGTTTAAGGCACTGGTTTGCTAAACCAGCGACCCGGCAACGGGT
CCACAGGTTCGAATCCTGTCGATGTCGCga
Downstream region at tRNA end position 
tcccatagta
Secondary structure (Cloverleaf model)
>VRL181000609	Ser	GCT
                   c      GCga tcccatagta
                     G - C
                     A - T
                     C - G
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    G       G T C G       A C A G G     C
    G         + | |                 T T
    T       A G G C
      T T A        A     CGACCCGGCAACGGGTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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