The detailed information of tRNA gene sequence


Sequence ID>VRL181000672
Genome IDMF405918
Search identical group
Phylum/ClassVaridnaviria
SpeciesTupanvirus deep ocean (MF405918)
Start position on genome 831853
End posion on genome 831771
Amino Acid Ser
Anticodon AGA
Upstream region at tRNA start position 
aattaattcg
tRNA gene sequence 
GGCGCTATGGCAGAATGGTAAATGCACCAGTCTAGAAAGCTGGAGTCCTTTGGACGTGTA
GGTTCGATTCCTACTGGCGCCGCta
Downstream region at tRNA end position 
aattgcttta
Secondary structure (Cloverleaf model)
>VRL181000672	Ser	AGA
                   g      GCta aattgcttta
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     A - T          T T
                    T     C A T C C     A
      T A A        G      | | | | |     G
    G       G A C G       G T A G G     C
    G         | | |                 T T
    T       A T G C
      A A          A     AGTCCTTTGGACGT
                    C - G
                    C - G
                    A - T
                    G - C
                    T + G
                  C       A
                  T       A
                    A G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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