The detailed information of tRNA gene sequence


Sequence ID>VRL181000676
Genome IDMF405918
Search identical group
Phylum/ClassVaridnaviria
SpeciesTupanvirus deep ocean (MF405918)
Start position on genome 831320
End posion on genome 831239
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
actaaaatta
tRNA gene sequence 
GGCTCTGTGGCAGAATGGTAATTGCACTGGTCTCGAAAACCAGCGTCCTTTGGACATCTA
GGTTCAATTCCTAGCGGAGCCGaat
Downstream region at tRNA end position 
taataataat
Secondary structure (Cloverleaf model)
>VRL181000676	Ser	CGA
                   a      Gaat taataataat
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T T
                    T     G A T C C     A
      T A A        G      | | | | |     A
    G       G A C G       C T A G G     C
    G       + | | |                 T T
    T       T T G C
      A A          A     CGTCCTTTGGACAT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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