The detailed information of tRNA gene sequence


Sequence ID>VRL181000717
Genome IDMF405918
Search identical group
Phylum/ClassVaridnaviria
SpeciesTupanvirus deep ocean (MF405918)
Start position on genome 116700
End posion on genome 116628
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tacaggcccc
tRNA gene sequence 
GGTTCCTTAGCTTAATGGTAAAGCACCACCCTGCAAAGGTGCGAGTTGTTGGTTCGAATC
CGACAGGGACCTCga
Downstream region at tRNA end position 
ttaaagttat
Secondary structure (Cloverleaf model)
>VRL181000717	Cys	GCA
                   c      TCga ttaaagttat
                     G - C
                     G - C
                     T - A
                     T + G
                     C - G
                     C - G
                     T - A          T A
                    T     C A G C C     A
        A A        A      | | + | |     G
      T     T T C G       G T T G G     C
      G     | | | |                 T T
      G     A A G C
        T A        A     GAGTT
                    C   C
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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