The detailed information of tRNA gene sequence


Sequence ID>VRL181000727
Genome IDMG461324
Search identical group
Phylum/ClassOrtervirales
SpeciesHuman immunodeficiency virus 1 (MG461324)
Start position on genome 293
End posion on genome 218
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
acagtggaag
tRNA gene sequence 
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC
CCCACGTTGGGCGCCA
Downstream region at tRNA end position 
ctgctagaga
Secondary structure (Cloverleaf model)
>VRL181000727	Lys	CTT
                   g      GCCA ctgctagaga
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T
                     G + T
                     C - G          C G
                    T     C A C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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