The detailed information of tRNA gene sequence


Sequence ID>VRL182000014
Genome IDJX997183
Search identical group
Phylum/ClassPhycodnaviridae
SpeciesParamecium bursaria Chlorella virus NYs1 (JX997183)
Start position on genome 180656
End posion on genome 180740
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gaaatcaaaa
tRNA gene sequence 
GGCAGAATCGGATAGCCTGGTCCATTCCGTCCCGCTCAAGACGGGAACCCTTCGGGGGCG
TGCGTTCAAATCGCACTTCTGCTACtg
Downstream region at tRNA end position 
ttggcgaact
Secondary structure (Cloverleaf model)
>VRL182000014	Leu	CAA
                   a      ACtg ttggcgaact
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     A - T          T A
                    T     C A C G C     A
    C C G A        C      | | | | |     A
  T         T A G G       G T G C G     C
  G           | | |                 T T
  G         T T C C
    T C C A        G     ACCCTTCGGGGGC
                    T - A
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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