The detailed information of tRNA gene sequence


Sequence ID>PL193000001
Genome IDAP018321
Search identical group
Phylum/ClassCyanobacteria
SpeciesNostoc sp. HK-01 NIES-2109 plasmid:phage/plasmid primase, P4 family protein (AP018321)
Start position on genome 71543
End posion on genome 71620
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacccaacgt
tRNA gene sequence 
GGGGGTGTAGCTTAGTCTGGTTTAAAGCAGTCGCCTGTCGAGCTTCATAACATGGGTTCA
AATCCCTTCATCCCCGCCt
Downstream region at tRNA end position 
tgtagccttg
Secondary structure (Cloverleaf model)
>PL193000001	Asp	GTC
                   t      GCCt tgtagccttg
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     T T C C C     A
    C T G A        A      |   | | |     A
  T         T T C G       A T G G G     C
  G         | | | |                 T T
  G         A A G C
    T T T A        A     ATAAC
                    G - C
                    T   T
                    C   T
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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