The detailed information of tRNA gene sequence


Sequence ID>PL193000092
Genome IDCP031152
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloplanus sp. CBA1113 plasmid:pCBA1113-02 (CP031152)
Start position on genome 10017
End posion on genome 10093
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccctaccgc
tRNA gene sequence 
GCTCCCGGAGTCTCCGTTGGCGAGAGACGCCACCTCTTCAAGGTGGAGGCCAGGGGTTCG
ATTCCCCTCGGGAGCACtc
Downstream region at tRNA end position 
ggggaggctg
Secondary structure (Cloverleaf model)
>PL193000092	Glu	TTC
                   c      ACtc ggggaggctg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    G     T C C C C     A
    T G C C        A      | | | | |     G
  T         T C T G       A G G G G     C
  G         | | | |                 T T
  G         A G A C
    C G A G        G     AGGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  C       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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