The detailed information of tRNA gene sequence


Sequence ID>PL191000007
Genome IDAP018321
Search identical group
Phylum/ClassCyanobacteria
SpeciesNostoc sp. HK-01 NIES-2109 plasmid:phage/plasmid primase, P4 family protein (AP018321)
Start position on genome 71707
End posion on genome 71780
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttccaaaaat
tRNA gene sequence 
GTCCAGGTCGCCTAATGGTAGGGTATTGGTCTGCAAAACCGACTGTGCGAGTTCAATTCT
CGCCCTGGACTCCA
Downstream region at tRNA end position 
aacgttgcag
Secondary structure (Cloverleaf model)
>PL191000007	Cys	GCA
                   t      TCCA aacgttgcag
                     G - C
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T T
                    T     C G C T C     A
        A A        C      | | | | |     A
      T     T C C G       G C G A G     C
      G     + | | +                 T T
      G     G G G T
        T A        A     CTGT
                    T - A
                    T + G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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