The detailed information of tRNA gene sequence


Sequence ID>PL191000008
Genome IDAP018321
Search identical group
Phylum/ClassCyanobacteria
SpeciesNostoc sp. HK-01 NIES-2109 plasmid:phage/plasmid primase, P4 family protein (AP018321)
Start position on genome 71786
End posion on genome 71860
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctccaaacgt
tRNA gene sequence 
TGCAGCGTCACCTAACGGCAAGGTACTCGGCTCATAACCGAGGATATGCGGGTTCAACTC
CCGTCGCTGCTACCA
Downstream region at tRNA end position 
aatgcacaga
Secondary structure (Cloverleaf model)
>PL191000008	Met	CAT
                   t      ACCA aatgcacaga
                     T   T
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T C
                    T     T G C C C     A
        A A        C      + | | | |     A
      C     T C C A       G C G G G     C
      G     | | | |                 T T
      G     A G G T
        C A        A     GATAT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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