The detailed information of tRNA gene sequence


Sequence ID>PL191000020
Genome IDAP018321
Search identical group
Phylum/ClassCyanobacteria
SpeciesNostoc sp. HK-01 NIES-2109 plasmid:phage/plasmid primase, P4 family protein (AP018321)
Start position on genome 74712
End posion on genome 74786
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cctgctgtat
tRNA gene sequence 
GGGGTCATAGCTCAACTGGCTAGAGCGTCCGCCTTGCAAGCGGAAGGTTAGGGGTTCAAA
TCCCCTTGATTCCACtg
Downstream region at tRNA end position 
tggtgtctga
Secondary structure (Cloverleaf model)
>PL191000020	Ala	TGC
                   t      ACtg tggtgtctga
                     G - C
                     G - C
                     G + T
                     G + T
                     T - A
                     C - G
                     A - T          T A
                    T     T C C C C     A
      C A A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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