The detailed information of tRNA gene sequence


Sequence ID>PL191000040
Genome IDCP000489
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParacoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489)
Start position on genome 894322
End posion on genome 894398
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgcacccgt
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGAGGAATCATAATCCTTGTGTCGGGGGTTCAAA
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
cttcccccct
Secondary structure (Cloverleaf model)
>PL191000040	Met	CAT
                   t      ACCA cttcccccct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK