The detailed information of tRNA gene sequence


Sequence ID>PL191000043
Genome IDCP000489
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParacoccus denitrificans PD1222 plasmid:phage/plasmid primase, P4 family (CP000489)
Start position on genome 1565680
End posion on genome 1565769
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgacccggct
tRNA gene sequence 
GGAAGCGTGGCCGAGTGGTTTAAGGCTCTGGTCTTGAAAACCAGCGTGGGGGAGACCCCA
CCGTGGGTTCGAATCCCACCGCTTCCGCCA
Downstream region at tRNA end position 
tttcaccaaa
Secondary structure (Cloverleaf model)
>PL191000043	Ser	TGA
                   t      GCCA tttcaccaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        T     CGTGGGGGAGACCCCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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