The detailed information of tRNA gene sequence


Sequence ID>PL191000172
Genome IDCP013102
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParaburkholderia caribensis MWAP64 plasmid: (CP013102)
Start position on genome 1832930
End posion on genome 1833020
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cctccccgcc
tRNA gene sequence 
GGAGAGATGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTATAGGTTAATAACCT
ATCCGGGGTTCGAATCCCCGTCTCTCCGCCA
Downstream region at tRNA end position 
aaagattgcc
Secondary structure (Cloverleaf model)
>PL191000172	Ser	GGA
                   c      GCCA aaagattgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       G T A G       C G G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TATAGGTTAATAACCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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