The detailed information of tRNA gene sequence


Sequence ID>PL191000220
Genome IDCP013682
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridium botulinum 1169 plasmid:pRSJ8_1 (CP013682)
Start position on genome 156533
End posion on genome 156460
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttataatat
tRNA gene sequence 
GCAGGGTTCGTCTAATGGCAAGACGGTGGCTTCCAAACCCACTTATGAGAGTTCGATTCT
TTCATCCTGTGCCA
Downstream region at tRNA end position 
agtgcatcat
Secondary structure (Cloverleaf model)
>PL191000220	Trp	CCA
                   t      GCCA agtgcatcat
                     G + T
                     C - G
                     A - T
                     G - C
                     G - C
                     G + T
                     T - A          T T
                    T     C T T T C     A
        A A        C      | | + | |     G
      T     T C T G       G A G A G     C
      G     | | | |                 T T
      G     A G A C
        C A        G     TTAT
                    G - C
                    T - A
                    G - C
                    G - C
                    C   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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