The detailed information of tRNA gene sequence


Sequence ID>PL191000674
Genome IDCP027853
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPlesiomonas shigelloides MS-17-188 plasmid:pPS-MS-17-188-1 (CP027853)
Start position on genome 69855
End posion on genome 69949
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
acattatcat
tRNA gene sequence 
GGAAGATCGTCGTTTCCGGTGAGGCGGCTGGACTTCAAATCCAGTTGGGGCTGCCAGCAG
TCCCGGGCAGGTTCAACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
attaagctct
Secondary structure (Cloverleaf model)
>PL191000674	Sec	TCA
                   t      GCCA attaagctct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     A
    G       T T G C       G C A G G     C
    G       + + | |                 T T
    T       G G C G
      G A          G     TTGGGGCTGCCAGCAGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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