The detailed information of tRNA gene sequence


Sequence ID>PL191000805
Genome IDCP030127
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesIndioceanicola profundi SCSIO 08040 plasmid:unnamed1 (CP030127)
Start position on genome 1068409
End posion on genome 1068333
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cggaagcttc
tRNA gene sequence 
GGGCTAGTAGCTCAGCTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGCAAGTTCAAA
TCTTGCCTGGCCCACCA
Downstream region at tRNA end position 
tacccggggg
Secondary structure (Cloverleaf model)
>PL191000805	Ile	GAT
                   c      ACCA tacccggggg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T A
                    T     C G T T C     A
      C G A        A      | | | | |     A
    T       C T C G       G C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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