The detailed information of tRNA gene sequence


Sequence ID>PL191000806
Genome IDCP030127
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesIndioceanicola profundi SCSIO 08040 plasmid:unnamed1 (CP030127)
Start position on genome 1068327
End posion on genome 1068252
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caccataccc
tRNA gene sequence 
GGGGGCGTAGCTCAGTTGGGAGAGCGCGTGCTTTGCAAGCATGAGGTCGTCGGTTCGATC
CCGTCCGCCTCCACCA
Downstream region at tRNA end position 
ggttcttggt
Secondary structure (Cloverleaf model)
>PL191000806	Ala	TGC
                   c      ACCA ggttcttggt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          C T
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G + T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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